Ash, I spent all day yesterday thinking about your post while I was running errands.

I absolutely agree that the media keeps "chickening out" when it comes to paranormal phenomena, but there may actually be a practical reason for it--at least with the fictional stuff. I happen to know for a fact that both "Heroes" and "The 4400" each had concerns about being too similar to "X-Men." And, of course, in X-Men the abilities are completely natural (unless enhanced as in the case of Wolverine). So at least part of the trend towards government-induced abilities might be a creative attempt to stand apart from the X-Men universe.
Also, I tend to see this as a "glass half full" situation. There are more and more shows centered around these ideas and the public is obviously responding well to them. This means they are (on some level) acclimating the idea of people having abilities whether it occurs naturally or is artificially induced somehow.
The problem is that most people seem to be terrified and violently reactive when you suggest that the fictional model might have a counterpart in real life. Hopefully, people like us along with the emerging wave of scientists supporting these ideas will help ease that transition.
What is also interesting is that in real life application, we are finding that while we are dealing with latent natural ability, we are going to need a good deal of hardwired technology to fully unlock these abilities. So there is a good chunk of truth to the "artificial induction" model anyway.
Oh, and I love "Fringe."--at least for now (JJ Abrams' stuff always starts strong but tends to poop out by the third season). I've been saving the latest episode to watch when I need a break!